Monthly Archives: November 2017

YSBupdates New YSB Project Update

Please join the project team for the quarterly Yale Science Building Town Hall on Monday, December 11th at 4pm in Sloane Physics Lab 59. This project update meeting will include a review of upcoming work inside the Kline Biology Tower lobby over the winter break, and work adjacent to Kline Biology Tower moving in to the new year.

A new Town Hall Meeting has been posted to the Yale Science Building project website. Please visit http://yalesciencebuilding.yale.edu/ to view.

Advertisements

farnam diskusage quota report

total 424 of 500TB

gg487 52143633408
sl857 38629086720
fn64 36880249728
tg397 26743508992
mg888 26464904832
jz435 26101485824
sk972 21563828736
pse5 19318394112
wum2 15638404480
sl2373 15014972672
cs784 13774488064
dl598 13628740352
ll426 12316527232
mr724 11240941952
sl847 8821790592
jad248 7989755008
pmm49 7842429568
yy222 6347266176
rrk24 6182451584
yf9 5816445952
hm444 5703124480
mihali 5456919552
lc848 4090249984
ah633 3367398912
bp272 2906803456
xk4 2250929024
meg98 2212199424
rdb9 1763952640
msp48 1748680320
jjl86 1608175104
as2665 1596345472
ky26 1583088768
ml724 1557992448
jw2394 1486822272
jl56 1480538368
ha275 1467031936
sb238 1275168128
gf3 1189340928
jrb97 1012897664
slw67 714219904
lh372 671649152
cy288 668739712
yz464 609522560
pdm32 607238656
jsr59 592016256
as898 506352512
dc547 409760512
jx98 390149120
mpw6 385383040
hz244 374372096
nb23 324053504
ls926 314810880
keckadmins 265108480
aa544 249558400
xl348 237334528
simen 163574272
xz374 162198144
lr579 159751424
yf95 150747264
km735 125403904
nmb38 115795456
jjl83 109213440
mas343 96425216
yk336 95688832
williams 95688832
zl222 68034176
rka24 59127808
xc279 52580992
yy448 46536704
aa65 44632832
gene760 33406080
wb244 30592128
zhao 25241600
amg89 21919360
co254 21889920
an377 19965312
xm24 19335680
jc2296 17970560
jw72 17455616
njc2 16694016
root 9156608
jk935 6167936
cc59 4636672
lc664 722944
gene760_2016 475520
bab99 387584
tl444 318848
dr395 185472
mj332 60160
rm658 4096
jjp76 3968

Gamze Gursoy, Ph.D

Postdoctoral Research Associate
Yale University
Molecular Biophysics & Biochemistry
Program in Computational Biology and Bioinformatics

SF424 (R&R) Application and Electronic Submission Information for NIH

Yet more thoughts on squeezing in stuff:

Margins: 0.5 inches all around
Normal: Arial 11 pt
Spacing:
– 12 pt spacing exactly & 0 before & after + 4 pt before major heads (except for in-line figures, then automatic ‘single spacing’) such as INNOVATION

– no widow/orphan control

– no spaces before paragraphs, just indents

– bullet (*) lists (eg for people)

Hyphenate! (Menu: Page Layout, Page Setup, Hyphenation, Automatic) ****

Legends: Arial 8.5 pt, Spacing exactly 8.4 pt. Hyphenated. ****

Titles: Cambria 12 pt looks nice, but flexible.

References: NIH Style EndNote. [1]

QT:{{”
NIH instructions write: “Use an Arial, Helvetica, Palatino Linotype, or Georgia typeface, a black font color, and a font size of 11 points or larger. (A Symbol font may be used to insert Greek letters or special characters; the font size requirement still applies.). Type density, including characters and spaces, must be no more than 15 characters per inch. Type may be no more than six lines per inch (1 inch = 72 points, six lines/inch = 12 pt exact spacing). Use standard paper size (8 ½” x 11) . Use at least one-half inch margins (top, bottom, left, and right) for all pages. No information should appear in the margins.”
“}}

QT:{{”

11. Descriptive Title of Applicant’s Project

Enter a brief descriptive title of the project. This field is required.

A “new” application must have a different title from any other PHS project with the same PD/PI. A “resubmission” or “renewal” application should normally have the same title as the previous grant or application. If the specific aims of the project have significantly changed, choose a new title.

A “revision” application must have the same title as the currently funded grant.

NIH and other PHS agencies limit title character length to 81 characters, including the spaces between words and punctuation. Titles in excess of 81 characters will be truncated. Be sure to only use standard characters in the descriptive title: A through Z, a through z, 0 through 9, space ( ), and underscore (_).

“}}

The above is OLD. Now you can go above 81 characters.

QT:{{”
Font

Prepare the application using Arial, Helvetica, Palatino Linotype, or Georgia typeface in black font color. After text attachments are converted to PDF, font size in each final PDF document must be at least 11 points (or larger). (A Symbol font may be used to insert Greek letters or special characters; the font size requirement still applies.) Since some PDF converters may reduce font sizes, it is important to confirm that type density in each final PDF document, including both characters and spaces, is no more than 15
characters+spaces per linear inch and no more than six lines per vertical inch.
“}}

Note: 72 points/inch so 6 lines/inch at 11pt type translates into a line spacing of 11 pts + 1pt per line.

QT:{{”
Paper Size and Page Margins

Final PDF documents should be formatted to be no larger than standard paper size (8 ½” x 11). The final PDF document should have at least one-half inch margins (top, bottom, left, and right) for all pages. No information should appear in the margins, including the PI’s name and page numbers.

….
Figures, Graphs, Diagrams, Charts, Tables, Figure Legends, and Footnotes You may use a smaller type size but it must be in a black font color, readily legible, and follow the font typeface requirement. Color can be used in figures; however, all text must be in a black font color, clear and legible.
“}}

http://grants.nih.gov/grants/funding/424

SBI Retreat- Please Registration

Not sure this is open to all. Best to check.

==

Please join us for Yale SBI Fall Retreat on Tuesday, November 21st held at the Yale Maurice R. Greenberg Conference Center. We want to use this event to primarily enhance the awareness of research directions in different labs, particularly empaneling the new directions and recent exciting developments. Attached is a draft schedule for the day.

Please register here https://westcampus.yale.edu/sbi-fall-retreat-registration

Meredith Morrow

Senior Administrative Assistant

Yale University, West Campus Administration

Systems Biology Institute

Andre Levchenko, Sidi Chen, and Michael Murrell

Telephone: (203) 737-6712
meredith.morrow

http://westcampus.yale.edu

Schedule Version 1_ Yale Systems Biology Institute Fall Retreat.pdf

farnam disk usage quota report

Total 419 of 500 TB

gg487 51460578688
fn64 38140206464
sl857 36063305984
tg397 26743508992
mg888 26291573632
jz435 26101484032
sk972 21556422912
pse5 19160145920
wum2 15631172352
sl2373 14927850880
cs784 13771339776
dl598 13624602112
ll426 12316527232
mr724 10537286144
sl847 8821790592
jad248 7989755008
pmm49 7842429568
yy222 6347266176
rrk24 6182451584
yf9 5816445952
hm444 5702808832
mihali 5456919552
lc848 4090249984
ah633 3367398912
bp272 2906803456
xk4 2250922880
rdb9 1763952640
msp48 1748680320
jjl86 1607077248
as2665 1596345472
ky26 1583088768
ml724 1557992448
jl56 1480538368
ha275 1467031936
jw2394 1410151680
sb238 1275168128
gf3 1189340928
jrb97 1012897664
slw67 714219904
lh372 671649152
yz464 609522560
pdm32 607238656
jsr59 592016256
cy288 587465216
jx98 514190080
as898 506352512
dc547 405033728
mpw6 385383040
hz244 374372096
nb23 324053504
ls926 314810880
keckadmins 265108480
aa544 249558400
xl348 237334528
simen 163574272
xz374 162198144
lr579 159751424
yf95 150747264
km735 125403904
nmb38 115795456
jjl83 109213440
mas343 96425216
yk336 95688832
williams 95688832
zl222 68034176
rka24 59127808
yy448 46536704
aa65 44632832
gene760 33406080
wb244 30592128
zhao 25241600
amg89 21919360
co254 21889920
an377 19965312
xm24 19335680
xc279 18964224
jc2296 17970560
jw72 17455616
njc2 16694016
root 9156608
jk935 6167936
cc59 4636672
meg98 1769856
lc664 722944
gene760_2016 475520
bab99 387584
tl444 300416
dr395 185472
mj332 60160
rm658 4096
jjp76 3968

Gamze Gursoy, Ph.D

Postdoctoral Research Associate
Yale University
Molecular Biophysics & Biochemistry
Program in Computational Biology and Bioinformatics

Genome Informatics meeting

LINKS

https://linkstream2.gerstein.info/tag/i0gi2017/

TWEETS

https://storify.com/markgerstein/favorite-tweets-from-genome-informatics-17-gi2017-

TALK

http://lectures.gersteinlab.org/summary/Mutations-in-2500-cancer-genomes–20171104-i0gi2017/

OTHER materials (passwd access) in
http://meetings.gersteinlab.org/2017/10.28/i0gi2017/

Links to “Oncology at the Limits” and TRACERx Consortium


Here is a link to the “Oncology at the Limits” Conference which is co-organised between UCL and Yale, …. It will be from
19th to 21st March at the Royal College of Physicians in London.

http://www.thelancet.com/education/at-the-limits/oncology-2017

https://www.atthelimits.org/

The Keynote this year was … about the Lung TRACERx consortium. It is a project which
performs multi-site sampling of tumours to gain an insight into subclonal populations, and also follows up on the presence, expansion or response to therapy of these subclones via circulating-tumour-DNA. …

http://www.thelancet.com/education/at-the-limits/oncology-2017/sequencing-cancer-genomes-and-personalising-cancer-treatments

….