Tag Archives: scilit
integrating personal genomes with EHR
Decoding the Genomics of Abdominal Aortic Aneurysm
Jingjing Li, Cuiping Pan, Sai Zhang, …, Ronald L. Dalman, Philip S. Tsao, Michael Snyder
Updated invitation: jclub, MTG =NEXT-in-list TIME:exact,Bass434 – jc00 (nor… @ Thu Aug 30, 2018 11:30am – 1pm (EDT) (all)
I’ll present "Multi-scale deep tensor factorization learns a latent representation of the human epigenome" for tomorrow’s journal club.
This paper from Noble’s lab presents a method to impute human epigenome, and demonstrated its usage in broad context.
This work was preceded by their previous work known as PREDICTD, which I will also discuss briefly tomorrow.
You can find the bioRxiv preprint here.
scientists on twitter: preaching to the choir or singing from the rooftops?
deletion of a single enhancer caused sex reversal in mouse
Revolutionary Quantum Computer is One Step Closer to Reality | Newsweek
Nature Communications paper:
The quantum Internet has arrived (and it hasn’t) | Nature
Genetics of the human face: Identification of large-effect single gene variants
JClub by BW on “3D clusters of somatic mutations in cancer reveal numerous rare mutations as functional targets”, Genome Medicine
3D clusters of somatic mutations…reveal numerous rare mutations as functional targets
https://GenomeMedicine.BiomedCentral.com/articles/10.1186/s13073-016-0393-x Introduces 3DHotSpots, which is one of a number of recent approaches (incl. CLUMPS, Hotspot3D, Mutation3D & HotMAPS) for finding groupings of somatic SNVs via structure
RNA sequencing on nanopores
Highly parallel direct RNA sequencing on an array of nanoporeshttps://www.nature.com/articles/nmeth.4577